Saxena Research Group

Journal Covers

“Efficient sampling of molecular orientations for Cu(II)-based DEER on protein labels” 

Z. Hasanbasri, N. Moriglioni, and S. Saxena, Phys. Chem. Chem. Phys., 25 (2023) 13275.

“Measurement of protein dynamics from site directed Cu(II) Labeling”

K. Singewald, H. Hunter, T. F.  Cunningham, S. Ruthstein, and S. Saxena, Analysis & Sensing, 3 (2023) e202200053.

“An optimal acquisition scheme for Q-band EPR distance measurements using Cu2+-based protein labels”

X. Bogetti, Z. Hasanbasri, H. R. Hunter and S. Saxena, Phys. Chem. Chem. Phys. 24 (2022) 14727.

“Orientation and dynamics of Cu2+ based DNA label from force field parameterized MD elucidates the relationship between EPR distance constraints and DNA backbone distances”

S. Ghosh, J. Casto, X. Bogetti, C. Arora, J. Wang, S. Saxena, Phys. Chem. Chem. Phys. 22 (2020) 26707.

“Going the dHis-tance: Site-directed Cu2+ labeling of proteins and nucleic acids”

A. Gamble Jarvi, X. Bogetti, K. Singewald, S. Ghosh, S. Saxena, Acc. Chem. Res. 54 (2021) 1481

“Development of Cu2+-based distance methods and force field parameters for the determination of PNA conformations and dynamics by EPR and MD simulations”

A. Gamble Jarvi, A. Sargun, X. Bogetti, J. Wang, C. Achim, and S. Saxena, J. Phys. Chem. B. 124 (2020) 7544.

“Molecular dynamics simulations based on newly developed force field parameters for Cu2+ spin labels provide insights into double Histidine based Double Electron Electron Resonance”

X. Bogetti, S. Ghosh, A. Gamble Jarvi, J. Wang, and S. Saxena, J. Phys. Chem. B. 124 (2020) 2788.

“Efficient localization of a native metal ion within a protein by Cu2+-based EPR distance measurements”

A. Gamble Jarvi, T. F. Cunningham, and S. Saxena, Phys. Chem. Chem. Phys. 21 (2019) 10238.

“EPR spectroscopy detects various active state conformations of the transcriptional regulator CueR”

H. Sameach, S. Ghosh, L. Gevorkyan-Airapetov, S. Saxena, and S. Ruthstein, Angew. Chem. Intl. Ed. 58 (2019) 3053.

“Increasing nitroxide lifetime in cells to enable in-cell protein structure and dynamics measurements by electron spin resonance spectroscopy”

K. Singewald, M. J. Lawless, and S. Saxena, J. Magn. Reson. 299 (2019) 21.

“On the use of Q-band DEER to resolve the relative orientations of two double histidine bound Cu2+ ions in a protein”

A. Gamble Jarvi, K. Ranguelova, S. Ghosh, R. Weber, and S. Saxena, J. Phys. Chem. B. 122 (2018) 10669.